Dolphin Research: Summaries

seeing through sound

understanding language

understanding questions

communication through television

vigilance

pointing gestures

awareness of one's own behaviors

awareness of one's own body parts

behavioral mimicry

dolphin research publications

Whale Research: Summaries

background of whale research

alaskan humpbacks

hawaiians and humpbacks

mating and reproduction

migration and habitat use

role of size

social behavior on winter grounds

whale song

whale research publications

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University of Hawai'i at Manoa, Doctoral dissertation

Computer-assisted matching of humbpack whale (Megaptera novaeangliae) fluke contours using a wavelet-based algorithm

Robert K. Uyeyama
University of Hawaii at Manoa
 
(C) 2007

Photography of the tail flukes of humpback whales (Megaptera novaeangliae) is the primary method of identifying individual animals, enabling the illumination of life history, migration, and social behavior.  Matching of photographs is currently performed manually, generally by comparing pigmentation patterns on the ventral face of the fluke.  However approximately one third of whales possess uniformly pigmented (all-black or all-white) flukes, which necessitates matching be performed on the scalloped pattern of the fluke’s trailing edge contour, a particularly labor-intensive process prone to fatigue and error.  The development of a semi-automated computer-based system for the matching flukes via edge contours is presented. 

In the pilot experiment, location features were extracted from the edge contour with a discrete wavelet transform (DWT) with Symlet 5 as the basis wavelet; in subsequent experiments, a continuous wavelet transform (CWT) using the same basis wavelet was utilized.  Feature matching was performed with a knowledge-based system emphasizing the matching of clusters of features within local subsets of the full contour, reflecting the manual matching strategies of experts.  A set of 250 photographs of all-black flukes representing an entire field season’s collection from the research program of The Dolphin Institute (TDI) was used for testing and development of the system. 

A hit rate of 62% and a false alarm rate of 0.16% were achieved, so that approximately one in every three match suggestions was a true match. This hit rate is comparable to estimates of the performance of a single pass of traditional manual matching on these all-black flukes; in TDI’s protocols, three such passes are ordinarily performed.  These results validate the utilization of location features as well as knowledge-based matching based on localized clusters of these features, and may justify the replacement of a single pass of manual matching with the computer-assisted system.  Future development will be directed toward usability requirements such as semi-automated edge extraction and an end-user interface, as well as efforts to further improve the hit rate so that the computer-assisted system may fully replace manual matching.

Dissertation committee:
Louis M. Herman, Chairperson
Todd R. Reed, Outside member (Dep't of Electrical Engineering)
Karl A. Minke
Joseph R. Mobley, Jr.
Adam A. Pack


Uyeyama, R.K. (2007). Computer-Assisted Matching of Humpback Whale (Megaptera novaeangliae) Fluke Contours Using a Wavelet-Based Algorithm. Doctoral dissertation, University of Hawaii at Manoa.

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